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Title: Assessment of the relationship between pre-chip and post-chip quality measures for Affymetrix GeneChip expression data.
Authors: Jones, L
Goldstein, DR
Hughes, G
Strand, AD
Collin, F
Dunnett, SB
Kooperberg, C
Aragaki, A
Olson, JM
Augood, SJ
Faull, RL
Luthi-Carter, R
Moskvina, V
Hodges, AK
First Published: 2006
Citation: BMC BIOINFORMATICS, 2006, 7, pp. 211-211
Abstract: Gene expression microarray experiments are expensive to conduct and guidelines for acceptable quality control at intermediate steps before and after the samples are hybridised to chips are vague. We conducted an experiment hybridising RNA from human brain to 117 U133A Affymetrix GeneChips and used these data to explore the relationship between 4 pre-chip variables and 22 post-chip outcomes and quality control measures.
DOI Link: 10.1186/1471-2105-7-211
eISSN: 1471-2105
Type: Journal Article
Appears in Collections:Published Articles, Dept. of Cell Physiology and Pharmacology

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