Please use this identifier to cite or link to this item: http://hdl.handle.net/2381/31914
Title: Folbos, a new foldback element in rice
Authors: Daskalova, Sasha M.
Scott, N. W.
Elliott, M. C.
First Published: 16-Sep-2005
Publisher: Genetics Society of Japan
Citation: Genes & Genetic Systems Vol. 80 (2005) No. 2 pp. 141-145
Abstract: A new class I foldback element, Folbos, has been discovered in O.sativa L. Its long terminal inverted repeats (IVRs) are 303 and 331 bp long and the left one encodes a short open reading frame of 76 codons. The IVRs consist of inner and outer domains, the latter built up of 6 tandem repeats of about 30 bp each. The central region is reresented by 90 bp conservative stretch adjacent to a variable length (19-33 bp) A-tail, which in most cases includes the sequence 5’-TGACTT-3’. Folbos targets AT-rich regions and the insertion results in 7 bp target site duplications. Half of the copies found in annotated sequences of O. sativa japonica cv. Nipponbare are positioned in close proximity to (< 1kb) or within the transcribed regions, thus they have the potential to contribute to plant genome evolution.
DOI Link: 10.1266/ggs.80.141
ISSN: 1341-7568
eISSN: 1880-5779
Links: https://www.jstage.jst.go.jp/article/ggs/80/2/80_2_141/_article
http://hdl.handle.net/2381/31914
Embargo on file until: 1-Jan-10000
Version: Publisher Version
Status: Peer-reviewed
Type: Journal Article
Rights: Copyright © 2005 by The Genetics Society of Japan
Description: The nucleotide sequence of Folbos reported in this paper is available in the Third Party Annotation Section of the DDBJ/EMBL/GenBank databases under the accession number TPA: BK001494. Article embargoed pending rights clearance from publisher.
Appears in Collections:Published Articles, Dept. of Biology

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