Please use this identifier to cite or link to this item: http://hdl.handle.net/2381/338
Title: Structural analysis of insulin minisatellite alleles reveals unusually large differences in diversity between Africans and non-Africans
Authors: Stead, John D.H.
Jeffreys, Alec J.
First Published: 28-Oct-2002
Publisher: University of Chicago Press
Citation: American Journal of Human Genetics, 2002, 71, pp.1273-1284
Abstract: The insulin minisatellite (INS VNTR) associates with susceptibility to a variety of diseases. We have developed a high-resolution system for analyzing variant repeat distributions applicable to all known minisatellite alleles, irrespective of size, which allows lineages of related alleles to be identified. This system has previously revealed extremely low structural diversity in the minisatellite among northern Europeans from the United Kingdom, with all alleles belonging to one of only three highly diverged lineages called “I,” “IIIA,” and “IIIB.” To explore the origins of this remarkably limited lineage diversity, we have characterized an additional 780 alleles from three non-African and three African populations. In total, 22 highly diverged lineages were identified, with structural intermediates absent from extant populations, suggesting a bottleneck within the ancestry of all humans. The difference between levels of diversity in Africans and non-Africans is unusually large, with all 22 lineages identified in Africa compared with only three lineages seen not only in the United Kingdom but also in the other non-African populations. We also find evidence for overrepresentation of lineage I chromosomes in non-Africans. These data are consistent with a common out-of-Africa origin and an unusually tight bottleneck within the ancestry of all non-African populations, possibly combined with differential and positive selection for lineage I alleles in non-Africans. The important implications of these data for future disease-association studies are discussed.
Links: http://hdl.handle.net/2381/338
Type: Article
Description: © 2002 by The American Society of Human Genetics. Also available from the journal website at http://www.journals.uchicago.edu/AJHG/home.html
Appears in Collections:Published Articles, Dept. of Genetics

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